Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447828 Ptep1.0/2.0 NW_024969765.1 118674 131544 + mitochondrial uncoupling protein 4 aug3.g1948 LOC107447828 0
LOC107451438 Ptep1.0/2.0 NW_024969892.1 963169 1050285 + afadin aug3.g4011,aug3.g19481,aug3.g18809 LOC110283474,LOC107451438 0
LOC122270446 Ptep1.0/2.0 NW_024970187.1 503474 526595 - uncharacterized LOC122270446 aug3.g19486 NA 3e-103
LOC107446971 Ptep1.0/2.0 NW_024970193.1 88524 290424 + soluble guanylate cyclase 88E aug3.g19488,aug3.g8981 LOC107446971 0
LOC107446947 Ptep1.0/2.0 NW_024970463.1 55121 304850 + protein still life, isoform SIF type 1 aug3.g19483 LOC107446947 0
LOC107446970 Ptep1.0/2.0 NW_024971616.1 21415 28377 - fibroin heavy chain-like aug3.g20324,aug3.g7951,aug3.g19487,aug3.g8809 LOC107446970 0
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02