Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446994 Ptep1.0/2.0 NW_024969993.1 587953 593544 - uncharacterized LOC107446994 aug3.g19510 LOC107446994 0
LOC107446993 Ptep1.0/2.0 NW_024969993.1 593675 634245 + son of sevenless homolog 2 aug3.g19511,aug3.g19512 LOC107446993 0
LOC107446995 Ptep1.0/2.0 NW_024969993.1 635736 666117 - coiled-coil domain-containing protein 39 aug3.g19513 LOC107446995 0
LOC107446992 Ptep1.0/2.0 NW_024969993.1 665155 697221 + alpha-1,2-mannosyltransferase ALG9 aug3.g19514 LOC107443456,LOC107446992 0
LOC107447876 Ptep1.0/2.0 NW_024970047.1 11166 31583 - uncharacterized LOC107447876 aug3.g1951 LOC107447876 0
LOC107447073 Ptep1.0/2.0 NW_024970119.1 613846 629089 + ornithine decarboxylase aug3.g19519 LOC107447073 0
LOC107446997 Ptep1.0/2.0 NW_024970225.1 667123 734167 + probable phospholipid-transporting ATPase IA aug3.g19515 LOC107446997 0
LOC107446012 Ptep1.0/2.0 NW_024970859.1 20417 212603 - kielin/chordin-like protein aug3.g12512,aug3.g19463,aug3.g14259,aug3.g19517 LOC107446012,LOC107447070,LOC107437660 0
LOC122271799 Ptep1.0/2.0 NW_024971156.1 111258 112273 + uncharacterized LOC122271799 aug3.g19514 NA 0.00000007
LOC107446998 Ptep1.0/2.0 NW_024972831.1 1447 9980 + intraflagellar transport protein 20 homolog aug3.g19516 LOC107446998 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02