Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447083 Ptep1.0/2.0 NW_024969639.1 1438611 1443366 + RING-box protein 2 aug3.g19539 LOC107447083 0
LOC107447084 Ptep1.0/2.0 NW_024969639.1 1445009 1454545 - transcription initiation factor TFIID subunit 9 aug3.g19538 LOC107447084 0
LOC107447080 Ptep1.0/2.0 NW_024969639.1 1459932 1477555 - angiomotin aug3.g19537 LOC107447080 0
LOC107447085 Ptep1.0/2.0 NW_024969639.1 1477796 1482062 + transmembrane protein 256 homolog aug3.g19536 LOC107447085 0
LOC107447079 Ptep1.0/2.0 NW_024969639.1 1486807 1519609 - calcium-activated chloride channel regulator 1 aug3.g24895,aug3.g19535 LOC107447081,LOC107447079 0
LOC107447082 Ptep1.0/2.0 NW_024969639.1 1524831 1546130 - cyclic GMP-AMP synthase-like aug3.g19535,aug3.g24785,aug3.g20048 LOC107447082 0
LOC107447850 Ptep1.0/2.0 NW_024970047.1 50499 52417 - poly [ADP-ribose] polymerase tankyrase-2-like aug3.g1953 LOC107447850 0
LOC122273300 Ptep1.0/2.0 NW_024975286.1 128 1090 + uncharacterized LOC122273300 aug3.g19534 NA 5e-62
LOC122273601 Ptep1.0/2.0 NW_024977670.1 2085 3713 - uncharacterized LOC122273601 aug3.g19535 LOC107447079 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02