Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447116 Ptep1.0/2.0 NW_024969915.1 847750 886833 - zinc metalloproteinase-disintegrin-like atrase-A aug3.g19550,aug3.g19597 LOC107447116 0
LOC107447866 Ptep1.0/2.0 NW_024970047.1 52828 60907 + histone H3.3A aug3.g1955 LOC107447866 0
LOC107447128 Ptep1.0/2.0 NW_024970388.1 3029 13373 + protein unc-93 homolog A aug3.g19552 LOC107447128 0
LOC107447117 Ptep1.0/2.0 NW_024970388.1 13503 32517 + UNC93-like protein aug3.g19553,aug3.g24190 LOC107447117 0
LOC107447129 Ptep1.0/2.0 NW_024970388.1 34220 45668 + UNC93-like protein aug3.g19555 LOC107447129 0
LOC107447124 Ptep1.0/2.0 NW_024970388.1 50274 83165 + UNC93-like protein aug3.g19556 LOC107447124 0
LOC107447127 Ptep1.0/2.0 NW_024970388.1 86751 96967 + UNC93-like protein aug3.g19557 LOC107447127 0
LOC107447122 Ptep1.0/2.0 NW_024970388.1 97885 107595 - ribosome-recycling factor, mitochondrial aug3.g19558 LOC107447122 0
LOC107447121 Ptep1.0/2.0 NW_024970388.1 107718 133180 + ribonuclease Z, mitochondrial aug3.g19559 LOC107447121 0
LOC110283083 Ptep1.0/2.0 NW_024970404.1 7624 8580 - protein unc-93 homolog A-like aug3.g19551 LOC110283083 0
LOC107450251 Ptep1.0/2.0 NW_024973323.1 2212 3847 - protein unc-93 homolog A aug3.g3235,aug3.g19551 LOC107450251 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02