Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447135 Ptep1.0/2.0 NW_024969938.1 12171 27700 + uncharacterized LOC107447135 aug3.g19570,aug3.g24775,aug3.g24610 LOC107447135 0
LOC107446216 Ptep1.0/2.0 NW_024969938.1 32968 121604 - complement C3 aug3.g19014,aug3.g19571 LOC107446216 0
LOC107447867 Ptep1.0/2.0 NW_024970047.1 80762 86554 + lysophosphatidylserine lipase ABHD12 aug3.g1957 LOC107447867 0
LOC107447160 Ptep1.0/2.0 NW_024970416.1 39544 53622 + uncharacterized LOC107447160 aug3.g19657,aug3.g19578 LOC107447160 0
LOC107447161 Ptep1.0/2.0 NW_024970416.1 104939 124168 + tryptophan--tRNA ligase, mitochondrial aug3.g19579 LOC107447161 0
LOC107447138 Ptep1.0/2.0 NW_024973756.1 4306 11787 + uncharacterized LOC107447138 aug3.g19575 LOC107447138 1e-51
LOC122273625 Ptep1.0/2.0 NW_024977853.1 2 3980 + uncharacterized LOC122273625 aug3.g19571 NA 2e-110
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02