Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107456147 Ptep1.0/2.0 NW_024969593.1 2282548 2284173 - uncharacterized LOC107456147 aug3.g354,aug3.g19635 LOC107456147 0
LOC107447857 Ptep1.0/2.0 NW_024970047.1 249309 251104 - speckle-type POZ protein B-like aug3.g1962,aug3.g27593,aug3.g19033,aug3.g1961,aug3.g21829,aug3.g1963,aug3.g1964 LOC107447857 0
LOC107447248 Ptep1.0/2.0 NW_024970682.1 50073 61973 - U-scoloptoxin(01)-Cw1a aug3.g19632 LOC107447248 0
LOC107436440 Ptep1.0/2.0 NW_024970898.1 28971 30269 + uncharacterized LOC107436440 aug3.g11566,aug3.g6873,aug3.g9987,aug3.g3618,aug3.g19631,aug3.g11752 LOC107436440 0
LOC122271928 Ptep1.0/2.0 NW_024971299.1 3521 6364 + potassium channel toxin alpha-KTX 12 Sp2-like aug3.g19636 NA 0
LOC107447250 Ptep1.0/2.0 NW_024971299.1 22825 41497 - uncharacterized LOC107447250 aug3.g19634 LOC107447250 8e-177
LOC107448814 Ptep1.0/2.0 NW_024971378.1 19501 28996 + histidine triad nucleotide-binding protein 3 aug3.g19637,aug3.g20473 LOC107447252,LOC107448814 0
LOC107447251 Ptep1.0/2.0 NW_024971378.1 36179 91958 - protein O-mannosyl-transferase TMTC4 aug3.g19638 LOC107447251 0
LOC122272622 Ptep1.0/2.0 NW_024972378.1 22288 23235 + ATP-dependent DNA helicase PIF1-like aug3.g19631 NA 0
LOC107452264 Ptep1.0/2.0 NW_024975353.1 882 5335 - 52 kDa repressor of the inhibitor of the protein kinase-like aug3.g4641,aug3.g11302,aug3.g19639,aug3.g20717 LOC107452264 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02