Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122269252 Ptep1.0/2.0 NW_024969777.1 12673 17512 + uncharacterized LOC122269252 aug3.g19659 NA 1e-124
LOC107451506 Ptep1.0/2.0 NW_024969916.1 775532 776770 - uncharacterized LOC107451506 aug3.g4072,aug3.g27813,aug3.g19658 LOC107451506 0
LOC107447871 Ptep1.0/2.0 NW_024970047.1 285989 297681 - protein BUD31 homolog aug3.g1965 LOC107447871 0
LOC107447160 Ptep1.0/2.0 NW_024970416.1 39544 53622 + uncharacterized LOC107447160 aug3.g19657,aug3.g19578 LOC107447160 0
LOC107447263 Ptep1.0/2.0 NW_024970453.1 9182 30781 + DNA primase large subunit aug3.g19652,aug3.g3060 LOC107447263 0
LOC107447261 Ptep1.0/2.0 NW_024970453.1 38837 59569 + mitochondrial import receptor subunit TOM70 aug3.g19651 LOC107447261 0
LOC107445185 Ptep1.0/2.0 NW_024970531.1 319983 321845 - uncharacterized LOC107445185 aug3.g19659,aug3.g16656,aug3.g13208 LOC107445185 0
LOC122271801 Ptep1.0/2.0 NW_024971158.1 101677 105798 + uncharacterized LOC122271801 aug3.g19659 NA 0
LOC107447272 Ptep1.0/2.0 NW_024971843.1 7938 17564 - uncharacterized LOC107447272 aug3.g19656,aug3.g19655 LOC107447272 0
LOC107441917 Ptep1.0/2.0 NW_024971843.1 25392 113683 - paramyosin aug3.g16258,aug3.g23006,aug3.g19654 LOC107441917 0
LOC107442535 Ptep1.0/2.0 NW_024971981.1 27831 28358 - uncharacterized LOC107442535 aug3.g969,aug3.g19659 LOC107442535 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02