Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107436597 Ptep1.0/2.0 NW_024969823.1 1619497 1698985 - ankyrin repeat and sterile alpha motif domain-containing protein 1B aug3.g11690,aug3.g19879 LOC107436597 0
LOC107447906 Ptep1.0/2.0 NW_024969898.1 334254 369657 - xylulose kinase aug3.g1987 LOC107447906 0
LOC107447907 Ptep1.0/2.0 NW_024969898.1 374101 381412 - uncharacterized LOC107447907 aug3.g1987 LOC107447907 0
LOC107441734 Ptep1.0/2.0 NW_024969905.1 99400 108619 + translation initiation factor eIF-2B subunit delta aug3.g16074,aug3.g19872 LOC107447609,LOC107441734 0
LOC107447610 Ptep1.0/2.0 NW_024969905.1 110178 142119 - dipeptidyl peptidase 3 aug3.g19871 LOC107447610 0
LOC107447605 Ptep1.0/2.0 NW_024969905.1 144492 170750 - dipeptidyl peptidase 3 aug3.g19870,aug3.g19871 LOC107447605 0
LOC107448610 Ptep1.0/2.0 NW_024970297.1 432115 480031 - small G protein signaling modulator 3 homolog aug3.g19876,aug3.g15347 LOC107448610 0
LOC107447615 Ptep1.0/2.0 NW_024970297.1 485688 506184 + sodium-coupled monocarboxylate transporter 1 aug3.g19875 LOC107447615 0
LOC107453513 Ptep1.0/2.0 NW_024970950.1 39200 133591 - E3 ubiquitin-protein ligase NEDD4 aug3.g5540,aug3.g5539,aug3.g19873 LOC107447611,LOC107453513 0
LOC107452458 Ptep1.0/2.0 NW_024971115.1 123190 162975 + kinesin heavy chain aug3.g4762,aug3.g4761,aug3.g5179,aug3.g19878,aug3.g11794 LOC107452458 0
LOC107453823 Ptep1.0/2.0 NW_024972371.1 8085 25295 - zinc finger protein 91-like aug3.g19874 LOC107453823,LOC107447613 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02