Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447694 Ptep1.0/2.0 NW_024969888.1 709325 805498 - low-density lipoprotein receptor-related protein 1 aug3.g19909,aug3.g22655,aug3.g18448 LOC107447694,LOC107439141 0
LOC107447897 Ptep1.0/2.0 NW_024969898.1 886487 926324 + uncharacterized LOC107447897 aug3.g1990 LOC107447897 0
LOC107439732 Ptep1.0/2.0 NW_024969918.1 304565 305599 - histone-lysine N-methyltransferase SETMAR-like aug3.g26886,aug3.g4814,aug3.g6378,aug3.g19902,aug3.g7639,aug3.g10386,aug3.g24814,aug3.g14434 LOC107439732 0
LOC107447668 Ptep1.0/2.0 NW_024969920.1 1130613 1147568 + protein bunched, class 2/F/G isoform aug3.g19904,aug3.g25852 LOC107447668 0
LOC107447667 Ptep1.0/2.0 NW_024969920.1 1151818 1176810 + cyclin-C aug3.g19905 LOC107447667 0
LOC107447666 Ptep1.0/2.0 NW_024969920.1 1177044 1198275 - regulator of nonsense transcripts 3B aug3.g19906 LOC107447666 0
LOC107447665 Ptep1.0/2.0 NW_024969920.1 1199781 1211842 - agmatinase, mitochondrial aug3.g19907 LOC107447665 0
LOC107455827 Ptep1.0/2.0 NW_024969920.1 1219422 1228742 - lysosome-associated membrane glycoprotein 1 aug3.g8065,aug3.g19908 LOC107455827 0
LOC107447664 Ptep1.0/2.0 NW_024971993.1 24772 36269 - uncharacterized LOC107447664 aug3.g19903 LOC107447664 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02