Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107441583 Ptep1.0/2.0 NW_024969637.1 467642 495810 + sterol regulatory element-binding protein 1 aug3.g27349,aug3.g19971 LOC107441583 0
LOC107447784 Ptep1.0/2.0 NW_024969795.1 182477 210765 - cytochrome P450 4C1-like aug3.g19975 LOC107447784 0
LOC107447930 Ptep1.0/2.0 NW_024969861.1 882670 991801 - cyclic nucleotide-gated cation channel beta-3 aug3.g1996,aug3.g1997 LOC107447930 0
LOC107449289 Ptep1.0/2.0 NW_024970126.1 530018 531418 + uncharacterized LOC107449289 aug3.g2662,aug3.g19973,aug3.g15317,aug3.g14203,aug3.g13435,aug3.g26558,aug3.g27548 LOC107449289 0
LOC107447780 Ptep1.0/2.0 NW_024970694.1 197815 207300 + facilitated trehalose transporter Tret1 aug3.g19974 LOC107447780 0
LOC122272756 Ptep1.0/2.0 NW_024972744.1 15 2051 - uncharacterized LOC122272756 aug3.g19975 NA 3e-144
LOC122273831 Ptep1.0/2.0 NW_024981138.1 76 714 + uncharacterized LOC122273831 aug3.g19973 NA 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02