Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448102 Ptep1.0/2.0 NW_024969616.1 2623035 2688706 - protein polybromo-1 aug3.g20121 LOC107448102 0
LOC107448103 Ptep1.0/2.0 NW_024969616.1 2688811 2701188 + protein FRG1 aug3.g20120 LOC107448103 0
LOC107447993 Ptep1.0/2.0 NW_024969638.1 1007800 1086792 - liprin-beta-1 aug3.g2012 LOC107447993 0
LOC107445234 Ptep1.0/2.0 NW_024969692.1 1222255 1223463 - glutamate receptor-like aug3.g20123,aug3.g18403 LOC107445234 0
LOC107447452 Ptep1.0/2.0 NW_024969769.1 8063 13662 + uncharacterized LOC107447452 aug3.g20128 LOC107447452 2e-70
LOC107442982 Ptep1.0/2.0 NW_024969832.1 975066 979577 - uncharacterized LOC107442982 aug3.g20128 LOC107442982 2e-88
LOC107444078 Ptep1.0/2.0 NW_024970048.1 484264 484710 + uncharacterized LOC107444078 aug3.g20122 LOC107444078 3e-165
LOC122270171 Ptep1.0/2.0 NW_024970077.1 73419 76544 + uncharacterized LOC122270171 aug3.g20128 NA 3e-91
LOC107440403 Ptep1.0/2.0 NW_024970498.1 255697 287326 - probable ATP-dependent RNA helicase DDX10 aug3.g14528,aug3.g20126 LOC107448106,LOC107448658,LOC107440403 0
LOC107448105 Ptep1.0/2.0 NW_024970498.1 325175 332864 + uncharacterized LOC107448105 aug3.g20125,aug3.g23322 LOC107448105 0
LOC122271060 Ptep1.0/2.0 NW_024970530.1 25914 28533 + uncharacterized LOC122271060 aug3.g20122 NA 0
LOC107448109 Ptep1.0/2.0 NW_024970938.1 137341 176460 - splicing factor, suppressor of white-apricot homolog aug3.g20129 LOC107448109 0
LOC107444425 Ptep1.0/2.0 NW_024970954.1 144976 153029 - uncharacterized LOC107444425 aug3.g20128 LOC107444425 2e-92
LOC122272169 Ptep1.0/2.0 NW_024971584.1 40829 41995 + uncharacterized LOC122272169 aug3.g20128 NA 4e-68
LOC122272330 Ptep1.0/2.0 NW_024971800.1 27769 30175 + uncharacterized LOC122272330 aug3.g20128 NA 5e-71
LOC122272370 Ptep1.0/2.0 NW_024971870.1 35683 36873 - uncharacterized LOC122272370 aug3.g20122 NA 3e-177
LOC122272986 Ptep1.0/2.0 NW_024973602.1 4584 5735 + uncharacterized LOC122272986 aug3.g20122 NA 0
LOC122273068 Ptep1.0/2.0 NW_024973943.1 5665 7764 + uncharacterized LOC122273068 aug3.g20128 NA 4e-89
LOC122273333 Ptep1.0/2.0 NW_024975528.1 295 1595 - uncharacterized LOC122273333 aug3.g20128 NA 4e-100
LOC122274125 Ptep1.0/2.0 NW_024993646.1 430 823 - uncharacterized LOC122274125 aug3.g20122 NA 6e-152
20 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02