Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448056 Ptep1.0/2.0 NW_024969602.1 68149 112670 - protein henna aug3.g2037,aug3.g5473 LOC107448056 0
LOC107448596 Ptep1.0/2.0 NW_024969652.1 1514174 1562590 - intracellular coagulation inhibitor 3 aug3.g20375,aug3.g20374 LOC107448596,LOC107448595 4e-147
LOC107448598 Ptep1.0/2.0 NW_024969652.1 1573527 1604901 + uncharacterized oxidoreductase ZK1290.5 aug3.g20376 LOC107448598 0
LOC107448594 Ptep1.0/2.0 NW_024969706.1 1621756 1654832 - uncharacterized LOC107448594 aug3.g20373 LOC107448594 1e-126
LOC110283118 Ptep1.0/2.0 NW_024970583.1 317062 322739 - uncharacterized LOC110283118 aug3.g20379 LOC110283118 0
LOC107448591 Ptep1.0/2.0 NW_024970775.1 236553 269518 + alanine--tRNA ligase, cytoplasmic aug3.g20371,aug3.g20372,aug3.g9202 LOC107448591 0
LOC107448593 Ptep1.0/2.0 NW_024970775.1 272899 285948 - uncharacterized LOC107448593 aug3.g20370 LOC107448593 0
LOC107445441 Ptep1.0/2.0 NW_024971056.1 26115 156566 - unconventional myosin-Va aug3.g18555,aug3.g20377 LOC107445441 0
LOC122273548 Ptep1.0/2.0 NW_024977094.1 3597 4143 - pseudogene aug3.g20370 NA 7e-108
LOC122273577 Ptep1.0/2.0 NW_024977376.1 1878 3199 - alanine--tRNA ligase, cytoplasmic-like aug3.g20372 NA 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02