Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448058 Ptep1.0/2.0 NW_024969602.1 155960 170271 + cell division control protein 1 aug3.g2040 LOC107448058 0
LOC107456321 Ptep1.0/2.0 NW_024969629.1 1670255 1684273 - cytochrome P450 9e2-like aug3.g20404 LOC107456321 0
LOC107448674 Ptep1.0/2.0 NW_024969751.1 922301 975454 + uncharacterized LOC107448674 aug3.g20402 LOC107448674 0
LOC107448675 Ptep1.0/2.0 NW_024969751.1 987408 1334429 - potassium voltage-gated channel subfamily H member 2 aug3.g13934,aug3.g20401,aug3.g13933 LOC107448675 0
LOC107448698 Ptep1.0/2.0 NW_024969844.1 478 28712 + ribosome biogenesis protein bop1 aug3.g13298,aug3.g20407 LOC107448698 0
LOC107445100 Ptep1.0/2.0 NW_024970285.1 349768 390193 + lithocholate 6-beta-hydroxylase aug3.g20404,aug3.g10095,aug3.g19024,aug3.g21098,aug3.g20405,aug3.g22410,aug3.g12839,aug3.g18814,aug3.g18813 LOC107445100 0
LOC107448697 Ptep1.0/2.0 NW_024970285.1 393419 429743 + cytochrome P450 9e2-like aug3.g20404 LOC107448697 0
LOC122272065 Ptep1.0/2.0 NW_024971449.1 1345 17583 - ribosome biogenesis protein bop1-like aug3.g20407 LOC107448698 0
LOC107448699 Ptep1.0/2.0 NW_024971449.1 17802 82610 + heat shock factor protein aug3.g20406 LOC107448699 0
LOC107448702 Ptep1.0/2.0 NW_024972489.1 20864 21373 - extensin-like aug3.g20408 LOC107448702 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02