Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107442709 Ptep1.0/2.0 NW_024970333.1 401614 403339 - speckle-type POZ protein-like aug3.g16777,aug3.g16774,aug3.g16775,aug3.g20657,aug3.g16770,aug3.g20659,aug3.g20658,aug3.g16772,aug3.g16767,aug3.g16768 LOC107442709 0
LOC107449264 Ptep1.0/2.0 NW_024971000.1 32352 33359 + TD and POZ domain-containing protein 1-like aug3.g20658 LOC107449264 0
LOC107442714 Ptep1.0/2.0 NW_024971000.1 49883 50389 + speckle-type POZ protein B-like aug3.g20658 LOC107442714 0
LOC107449268 Ptep1.0/2.0 NW_024973218.1 9779 10780 + speckle-type POZ protein-like aug3.g20658 LOC107449268 0
LOC107449266 Ptep1.0/2.0 NW_025000726.1 7 593 - BTB/POZ and MATH domain-containing protein 5-like aug3.g20658 LOC107449266 0
5 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02