Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446112 Ptep1.0/2.0 NW_024969627.1 404734 427564 - protein arginine methyltransferase NDUFAF7, mitochondrial aug3.g18935,aug3.g20662 LOC107446112 0
LOC107441610 Ptep1.0/2.0 NW_024969627.1 427871 443673 + H/ACA ribonucleoprotein complex non-core subunit NAF1 aug3.g9840,aug3.g20661 LOC107445544,LOC107441610 0
LOC107442231 Ptep1.0/2.0 NW_024969650.1 503170 644233 + uncharacterized LOC107442231 aug3.g27564,aug3.g20669,aug3.g20671 LOC107442231 0
LOC107449282 Ptep1.0/2.0 NW_024969650.1 506400 508707 + uncharacterized LOC107449282 aug3.g20669 LOC107449282 0
LOC107449274 Ptep1.0/2.0 NW_024969716.1 673020 687673 + calcineurin B homologous protein 1 aug3.g20665 LOC107449274 0
LOC107449277 Ptep1.0/2.0 NW_024969725.1 1221540 1242990 - ubiquitin carboxyl-terminal hydrolase 1 aug3.g20666,aug3.g21534 LOC107449277,LOC107451589 0
LOC107448090 Ptep1.0/2.0 NW_024970074.1 559109 563918 + uncharacterized LOC107448090 aug3.g2066 LOC107448090 6e-88
LOC107449276 Ptep1.0/2.0 NW_024970612.1 10187 87872 - uncharacterized LOC107449276 aug3.g20667 LOC107449276 2e-129
LOC107442715 Ptep1.0/2.0 NW_024971000.1 2330 10582 - TD and POZ domain-containing protein 3-like aug3.g20660,aug3.g16773 LOC107442715 0
LOC107449267 Ptep1.0/2.0 NW_024971000.1 22401 23456 - TD and POZ domain-containing protein 3 aug3.g20660 LOC107449267 0
LOC107449271 Ptep1.0/2.0 NW_024971852.1 14278 36773 - CUB and zona pellucida-like domain-containing protein 1 aug3.g20663 LOC107449271 0
LOC122273168 Ptep1.0/2.0 NW_024974516.1 1873 4292 + uncharacterized LOC122273168 aug3.g20661 NA 1e-51
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02