Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107436355 Ptep1.0/2.0 NW_024969815.1 763066 807749 - oocyte zinc finger protein XlCOF6.1 aug3.g18966,aug3.g16370,aug3.g11139,aug3.g23931,aug3.g10099,aug3.g19028,aug3.g26680,aug3.g658,aug3.g6866,aug3.g3777,aug3.g13767,aug3.g1246,aug3.g20365,aug3.g12813,aug3.g18681,aug3.g5858,aug3.g20791,aug3.g17997,aug3.g11223,aug3.g15649,aug3.g3781,aug3.g2204 LOC107454207,LOC107436355 0
LOC122270159 Ptep1.0/2.0 NW_024970074.1 289986 292829 - uncharacterized LOC122270159 aug3.g2079 NA 0
LOC107449489 Ptep1.0/2.0 NW_024970603.1 204118 283692 - non-POU domain-containing octamer-binding protein aug3.g20793 LOC107449565,LOC107449489 0
LOC122271263 Ptep1.0/2.0 NW_024970679.1 99854 121426 + uncharacterized LOC122271263 aug3.g15068,aug3.g20794 NA 0
LOC107440698 Ptep1.0/2.0 NW_024970679.1 128102 161324 - fatty-acid amide hydrolase 2-B-like aug3.g14755,aug3.g20795 LOC107440698 0
LOC107436174 Ptep1.0/2.0 NW_024970831.1 78377 150673 + uncharacterized LOC107436174 aug3.g11353,aug3.g20797 LOC107436174 0
LOC107448251 Ptep1.0/2.0 NW_024971508.1 14091 18153 - phosphatidylcholine translocator ABCB4-like aug3.g20796 LOC107448251 0
LOC107442799 Ptep1.0/2.0 NW_024971508.1 28174 71864 - phosphatidylcholine translocator ABCB4-like aug3.g21720,aug3.g16833,aug3.g5427,aug3.g5428,aug3.g20796,aug3.g22230,aug3.g20215 LOC107442799 0
LOC107442935 Ptep1.0/2.0 NW_024971908.1 55161 76117 + astacin-like metalloprotease toxin 5 aug3.g16943,aug3.g20790,aug3.g27423 LOC107442935 0
LOC107449484 Ptep1.0/2.0 NW_024971943.1 2304 4504 + astacin-like metalloprotease toxin 4 aug3.g20790 LOC107449484 0
LOC107449485 Ptep1.0/2.0 NW_024971943.1 14255 24797 + astacin-like metalloprotease toxin 5 aug3.g20790 LOC107449485 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02