Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122271711 Ptep1.0/2.0 NW_024969645.1 18026 119776 - protein FAM117B-like aug3.g14782,aug3.g22950,aug3.g20844 NA 0
LOC107445638 Ptep1.0/2.0 NW_024969645.1 160942 180000 - mediator of RNA polymerase II transcription subunit 19 aug3.g1099,aug3.g20845 LOC107445638 0
LOC107449640 Ptep1.0/2.0 NW_024969962.1 217856 251945 + protein SSUH2 homolog aug3.g20848 LOC107449640 0
LOC107449641 Ptep1.0/2.0 NW_024969962.1 288530 303439 - probable serine/threonine-protein kinase kinX aug3.g20847 LOC107449641 0
LOC122270123 Ptep1.0/2.0 NW_024970062.1 1350308 1350823 - uncharacterized LOC122270123 aug3.g322,aug3.g24982,aug3.g21347,aug3.g19154,aug3.g18410,aug3.g9789,aug3.g24140,aug3.g5789,aug3.g9585,aug3.g17955,aug3.g10075,aug3.g27721,aug3.g23282,aug3.g20842,aug3.g585,aug3.g19946,aug3.g25069 NA 0
LOC107448085 Ptep1.0/2.0 NW_024970074.1 86044 111427 + cytochrome P450 3A11-like aug3.g2084 LOC107448085 0
LOC107437756 Ptep1.0/2.0 NW_024970188.1 402982 437777 + pancreatic lipase-related protein 2-like aug3.g20846,aug3.g14291,aug3.g12556,aug3.g18622,aug3.g20137,aug3.g27211 LOC107437756 0
LOC122270658 Ptep1.0/2.0 NW_024970304.1 79961 96465 - pancreatic lipase-related protein 2-like aug3.g20849,aug3.g14518 NA 0
LOC107440396 Ptep1.0/2.0 NW_024970304.1 152132 177266 + pancreatic lipase-related protein 2-like aug3.g20849,aug3.g10123,aug3.g2796 LOC107440396 0
LOC107449604 Ptep1.0/2.0 NW_024970796.1 149808 197803 + myb-binding protein 1A aug3.g20840 LOC107449604 0
LOC107449596 Ptep1.0/2.0 NW_024970796.1 199926 202805 - putative ankyrin repeat protein RF_0381 aug3.g20841 LOC107449596 0
LOC107447755 Ptep1.0/2.0 NW_024971253.1 38522 111289 - uncharacterized LOC107447755 aug3.g23076,aug3.g19950,aug3.g26462,aug3.g19951,aug3.g19949,aug3.g19947,aug3.g23507,aug3.g20843 LOC107447755 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02