Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448086 Ptep1.0/2.0 NW_024970074.1 43465 69248 + cytochrome P450 3A11-like aug3.g19738,aug3.g2085 LOC107448086 0
LOC107449666 Ptep1.0/2.0 NW_024970197.1 489100 498488 - aprataxin aug3.g20858 LOC107449666 0
LOC107449665 Ptep1.0/2.0 NW_024970197.1 500376 522136 + RCC1 and BTB domain-containing protein 1 aug3.g20857 LOC107449665 0
LOC107449642 Ptep1.0/2.0 NW_024970304.1 185774 191830 - uncharacterized LOC107449642 aug3.g20850 LOC107449642 0
LOC107449644 Ptep1.0/2.0 NW_024970304.1 198225 211857 + uncharacterized LOC107449644 aug3.g20851,aug3.g20863 LOC107449644 0
LOC107449664 Ptep1.0/2.0 NW_024972127.1 2020 28763 - blastula protease 10 aug3.g20856,aug3.g12816 LOC107449664 0
LOC122272736 Ptep1.0/2.0 NW_024972685.1 968 17594 + cytochrome P450 3A11-like aug3.g2085 NA 0
LOC107449646 Ptep1.0/2.0 NW_024974888.1 4908 5378 - protein maternal effect lethal 26-like aug3.g20853 LOC107449646 0
LOC107439678 Ptep1.0/2.0 NW_024984574.1 553 1463 + speckle-type POZ protein-like aug3.g23259,aug3.g20853,aug3.g20852,aug3.g4024,aug3.g19293,aug3.g4025,aug3.g21005,aug3.g19294 LOC107439678 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02