Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107450364 Ptep1.0/2.0 NW_024969995.1 382660 397875 - uncharacterized LOC107450364 aug3.g21168,aug3.g15925 LOC107450364 0
LOC107450347 Ptep1.0/2.0 NW_024970171.1 50155 66013 - tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like aug3.g21161 LOC107447879,LOC107450347 0
LOC107450348 Ptep1.0/2.0 NW_024970171.1 66164 84726 + uncharacterized LOC107450348 aug3.g21162 LOC107450348 0
LOC122270412 Ptep1.0/2.0 NW_024970171.1 84979 87881 + uncharacterized LOC122270412 aug3.g21162 NA 0
LOC107436832 Ptep1.0/2.0 NW_024970222.1 468443 529159 - nose resistant to fluoxetine protein 6-like aug3.g11862,aug3.g11863,aug3.g24399,aug3.g21164 LOC107436832,LOC107456990 0
LOC107450360 Ptep1.0/2.0 NW_024970636.1 70830 104367 - uncharacterized LOC107450360 aug3.g21165,aug3.g21166 LOC107450361,LOC107450360 0
LOC107448174 Ptep1.0/2.0 NW_024970710.1 233013 250093 + beclin 1-associated autophagy-related key regulator aug3.g2116 LOC107448174 0
LOC107447307 Ptep1.0/2.0 NW_024971214.1 14262 18868 + uncharacterized LOC107447307 aug3.g21167 LOC107447307 0
LOC107450358 Ptep1.0/2.0 NW_024971959.1 571 25500 + pancreatic triacylglycerol lipase-like aug3.g21164 LOC107450358 0
LOC122272445 Ptep1.0/2.0 NW_024972021.1 849 14145 - pancreatic triacylglycerol lipase-like aug3.g21164 NA 0
LOC107450374 Ptep1.0/2.0 NW_024972637.1 52 550 + putative E3 ubiquitin-protein ligase makorin-4 aug3.g21169 LOC107450374 0
LOC110283330 Ptep1.0/2.0 NW_024972665.1 10652 15547 + uncharacterized LOC110283330 aug3.g21167,aug3.g11138 LOC110283330 0
LOC122273700 Ptep1.0/2.0 NW_024978800.1 554 2638 + uncharacterized LOC122273700 aug3.g21167 LOC107450363 1e-79
LOC107443240 Ptep1.0/2.0 NW_024979215.1 1467 2780 - E3 ubiquitin-protein ligase makorin-1-like aug3.g17113,aug3.g21169 LOC107443240 0
14 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02