Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107450518 Ptep1.0/2.0 NW_024969639.1 22366 91049 + neurogenic locus Notch protein aug3.g21218 LOC107450518 0
LOC107450520 Ptep1.0/2.0 NW_024969639.1 97583 114913 - uncharacterized LOC107450520 aug3.g21219 LOC107450520 0
LOC107442769 Ptep1.0/2.0 NW_024969672.1 162686 290950 - neurogenic locus Notch protein aug3.g27737,aug3.g21218 LOC107442769 0
LOC107448175 Ptep1.0/2.0 NW_024969692.1 91924 128074 - phosphatidylinositide phosphatase SAC2 aug3.g2121,aug3.g2122 LOC107448175 0
LOC107443491 Ptep1.0/2.0 NW_024969840.1 209037 212483 - uncharacterized LOC107443491 aug3.g27987,aug3.g17748,aug3.g17746,aug3.g17747,aug3.g21211,aug3.g17627 LOC107443491 0
LOC110283103 Ptep1.0/2.0 NW_024969856.1 634995 847973 + protein trachealess-like aug3.g7456,aug3.g21212 LOC110283103 0
LOC107450494 Ptep1.0/2.0 NW_024970640.1 217382 238534 + fatty-acid amide hydrolase 2-like aug3.g21210 LOC107450494 0
LOC107448216 Ptep1.0/2.0 NW_024970813.1 196051 225244 - A-kinase anchor protein 10, mitochondrial aug3.g20208,aug3.g21213 LOC107448216 0
LOC107436755 Ptep1.0/2.0 NW_024972114.1 14245 31302 - fatty-acid amide hydrolase 2-A-like aug3.g21210,aug3.g26605,aug3.g26100,aug3.g26101 LOC107436755 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02