Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107450535 Ptep1.0/2.0 NW_024969676.1 1353565 1375394 - flavin-containing monooxygenase 5-like aug3.g21230 LOC107450535 0
LOC107448186 Ptep1.0/2.0 NW_024969692.1 128270 130100 + caspase-9 aug3.g2123 LOC107448186 0
LOC107450537 Ptep1.0/2.0 NW_024969837.1 1071494 1087515 + fatty acid-binding protein aug3.g21231 LOC107450537,LOC107444014 0
LOC107449232 Ptep1.0/2.0 NW_024969837.1 1091346 1111054 - uncharacterized LOC107449232 aug3.g21232 LOC107449232 0
LOC107450564 Ptep1.0/2.0 NW_024969934.1 302475 311984 + uncharacterized LOC107450564 aug3.g21234,aug3.g11369 LOC107450564 0
LOC107442496 Ptep1.0/2.0 NW_024969934.1 334892 346215 - estradiol 17-beta-dehydrogenase 2 aug3.g27654,aug3.g27653,aug3.g21235 LOC107442496 0
LOC122268629 Ptep1.0/2.0 NW_025010386.1 67 386 + uncharacterized LOC122268629 aug3.g21238 NA 1e-86
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02