Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122269440 Ptep1.0/2.0 NW_024969610.1 1004189 1007580 + uncharacterized LOC122269440 aug3.g2137 NA 0
LOC110282463 Ptep1.0/2.0 NW_024969633.1 1019471 1030283 - 60S ribosomal protein L11 aug3.g21375 LOC110282463 0
LOC107450991 Ptep1.0/2.0 NW_024969805.1 716421 717268 + protein lethal(2)essential for life aug3.g21377 LOC107450991 0
LOC107450989 Ptep1.0/2.0 NW_024969805.1 736307 742241 - metacaspase-1 aug3.g21378 LOC107450989 0
LOC107444278 Ptep1.0/2.0 NW_024970504.1 4144 89333 + serine-rich adhesin for platelets-like aug3.g19161,aug3.g21379,aug3.g24547,aug3.g21296 LOC107444278 0
LOC107439929 Ptep1.0/2.0 NW_024972147.1 20675 21590 - protein lethal(2)essential for life-like aug3.g14130,aug3.g21377,aug3.g14131 LOC107439929 0
LOC122273239 Ptep1.0/2.0 NW_024974893.1 3647 5226 + uncharacterized LOC122273239 aug3.g21376 NA 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02