Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448225 Ptep1.0/2.0 NW_024969610.1 961767 981605 - MAP kinase-activated protein kinase 2 aug3.g2139 LOC107448225 0
LOC122270087 Ptep1.0/2.0 NW_024970045.1 542807 548198 + uncharacterized LOC122270087 aug3.g21392 NA 2e-136
LOC110282659 Ptep1.0/2.0 NW_024970281.1 342402 344714 - tigger transposable element-derived protein 6 aug3.g11925,aug3.g21391 LOC110282659 0
LOC107440952 Ptep1.0/2.0 NW_024970457.1 253080 273293 - phosphoglucomutase-like aug3.g7192,aug3.g21394,aug3.g7194 LOC107440952 0
LOC107451106 Ptep1.0/2.0 NW_024970956.1 36287 59374 - hydroxyacid-oxoacid transhydrogenase, mitochondrial aug3.g21398 LOC107451106 0
LOC107439083 Ptep1.0/2.0 NW_024971071.1 25832 45981 - sorting nexin-17 aug3.g21390,aug3.g13561 LOC107451079,LOC107439083 0
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02