Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448230 Ptep1.0/2.0 NW_024969610.1 878341 918271 - ubiquitin carboxyl-terminal hydrolase 4 aug3.g2141 LOC107448230 0
LOC107451165 Ptep1.0/2.0 NW_024969809.1 632669 637641 - 39S ribosomal protein L54, mitochondrial aug3.g21410,aug3.g24315 LOC107451165,LOC107442794 0
LOC107452094 Ptep1.0/2.0 NW_024969970.1 365642 419816 + RNA cytidine acetyltransferase aug3.g4518,aug3.g21413,aug3.g4519 LOC107452094 0
LOC107449950 Ptep1.0/2.0 NW_024970170.1 379370 410601 - uncharacterized LOC107449950 aug3.g21019,aug3.g21419,aug3.g11481 LOC107449950 0
LOC107447594 Ptep1.0/2.0 NW_024970391.1 111909 244802 - uncharacterized LOC107447594 aug3.g1824,aug3.g21416 LOC107447594,LOC107451188 0
LOC122271315 Ptep1.0/2.0 NW_024970719.1 4084 6142 - uncharacterized LOC122271315 aug3.g12155,aug3.g21414 NA 0
LOC122273171 Ptep1.0/2.0 NW_024974525.1 5239 6645 - uncharacterized LOC122273171 aug3.g21697,aug3.g21418 NA 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02