Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446817 Ptep1.0/2.0 NW_024969601.1 1395489 1398956 + uncharacterized LOC107446817 aug3.g17371,aug3.g1474,aug3.g21423,aug3.g1664 LOC107446817 0
LOC107448236 Ptep1.0/2.0 NW_024969610.1 826987 872622 + uncharacterized LOC107448236 aug3.g2142 LOC107448236 0
LOC107451206 Ptep1.0/2.0 NW_024969796.1 1033485 1041043 - uncharacterized LOC107451206 aug3.g21424 LOC107451206 0
LOC107440693 Ptep1.0/2.0 NW_024969870.1 110710 150103 - kynurenine 3-monooxygenase-like aug3.g14749,aug3.g21420 LOC107440693 0
LOC107454270 Ptep1.0/2.0 NW_024970100.1 423795 541267 + putative polypeptide N-acetylgalactosaminyltransferase 9 aug3.g23989,aug3.g21426 LOC107454270 0
LOC107453846 Ptep1.0/2.0 NW_024970179.1 307659 314730 - N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase aug3.g5825,aug3.g21429 LOC107453846 0
LOC107451217 Ptep1.0/2.0 NW_024971412.1 1046 12466 + transmembrane protein 104 aug3.g21428 LOC107451217 0
LOC107450793 Ptep1.0/2.0 NW_024972671.1 2235 19099 - transmembrane protein 104 aug3.g21428,aug3.g21326 LOC107450793 0
LOC122272901 Ptep1.0/2.0 NW_024973252.1 3970 7414 - uncharacterized LOC122272901 aug3.g21421,aug3.g8388,aug3.g11902 NA 0
LOC122272933 Ptep1.0/2.0 NW_024973351.1 690 11097 + kynurenine 3-monooxygenase-like aug3.g21420 LOC107440693 0
LOC107451214 Ptep1.0/2.0 NW_024976188.1 370 1833 - rho-related BTB domain-containing protein 3-like aug3.g15809,aug3.g21425,aug3.g22048,aug3.g14229 LOC107451214 0
LOC122273637 Ptep1.0/2.0 NW_024977986.1 1 3778 - uncharacterized LOC122273637 aug3.g21420 LOC107451205 1e-139
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02