Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448235 Ptep1.0/2.0 NW_024969610.1 656051 660658 - small integral membrane protein 20 aug3.g2150 LOC107448235 0
LOC107451513 Ptep1.0/2.0 NW_024969780.1 591227 792095 + LIM domain-binding protein 2 aug3.g21506,aug3.g21735 LOC107451513 0
LOC122269268 Ptep1.0/2.0 NW_024969780.1 791806 868620 - uncharacterized LOC122269268 aug3.g21506 NA 2e-67
LOC107451515 Ptep1.0/2.0 NW_024969780.1 819498 886790 + uncharacterized LOC107451515 aug3.g21507 LOC107451515 0
LOC107451514 Ptep1.0/2.0 NW_024969780.1 889646 893868 - protein slit-like aug3.g21508,aug3.g26188 LOC107451514 0
LOC107438973 Ptep1.0/2.0 NW_024970040.1 106034 172194 - NAD kinase aug3.g13503,aug3.g21503 LOC107438973 0
LOC122274076 Ptep1.0/2.0 NW_024990457.1 789 1159 + uncharacterized LOC122274076 aug3.g2150 LOC107448235 2e-145
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02