Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107453490 Ptep1.0/2.0 NW_024969603.1 913790 914899 + uncharacterized LOC107453490 aug3.g25759,aug3.g2165 LOC107453490 0
LOC107441964 Ptep1.0/2.0 NW_024969626.1 185496 235806 + putative ATP-dependent RNA helicase TDRD12 aug3.g7265,aug3.g7264,aug3.g21650,aug3.g21833 LOC107452019,LOC107441964 0
LOC107452034 Ptep1.0/2.0 NW_024969918.1 897971 1048584 - uncharacterized LOC107452034 aug3.g21655,aug3.g26882,aug3.g14666 LOC107452034,LOC107439741 0
LOC107445034 Ptep1.0/2.0 NW_024970138.1 123696 124985 - probable glutamate receptor aug3.g7479,aug3.g13983,aug3.g7480,aug3.g22940,aug3.g21656 LOC107445034 0
LOC107443936 Ptep1.0/2.0 NW_024971848.1 872 44489 + uncharacterized phosphotransferase YvkC-like aug3.g15994,aug3.g21652,aug3.g24498 LOC107443936,LOC107452030 0
5 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02