Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107452524 Ptep1.0/2.0 NW_024969912.1 709120 723090 - uncharacterized LOC107452524 aug3.g21753,aug3.g21454 LOC107452524 0
LOC107452523 Ptep1.0/2.0 NW_024969912.1 725034 733871 + uncharacterized LOC107452523 aug3.g21754,aug3.g21753 LOC107452523 0
LOC107448370 Ptep1.0/2.0 NW_024970018.1 87244 93373 + transmembrane emp24 domain-containing protein 7 aug3.g2175 LOC107448370 0
LOC107437007 Ptep1.0/2.0 NW_024970249.1 78044 183244 + neuroblastoma-amplified sequence aug3.g11960,aug3.g21757 LOC107437007,LOC107452545 0
LOC107452547 Ptep1.0/2.0 NW_024970268.1 359623 361881 - venom peptide SjAPI-like aug3.g21758 LOC107452547 0
LOC107452548 Ptep1.0/2.0 NW_024970268.1 365387 375676 - venom peptide SjAPI-2-like aug3.g17093,aug3.g21759,aug3.g17094 LOC107443201,LOC107452548 2e-172
LOC122271444 Ptep1.0/2.0 NW_024970817.1 23030 32525 - lysosomal acid phosphatase-like aug3.g21756 NA 2e-160
LOC107436117 Ptep1.0/2.0 NW_024973714.1 4118 9788 - uncharacterized LOC107436117 aug3.g11328,aug3.g21755 LOC107436117 0
LOC122273143 Ptep1.0/2.0 NW_024974366.1 2625 7240 - uncharacterized LOC122273143 aug3.g21756 LOC107452538 7e-176
LOC107452538 Ptep1.0/2.0 NW_024974721.1 2467 5744 - lysosomal acid phosphatase-like aug3.g21756,aug3.g26940 LOC107452538 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02