Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447503 Ptep1.0/2.0 NW_024969799.1 941324 961639 + sialin aug3.g25664,aug3.g21772 LOC107447503,LOC107452592 0
LOC107452690 Ptep1.0/2.0 NW_024969887.1 86495 125162 - uncharacterized LOC107452690 aug3.g14282,aug3.g21779 LOC107440131,LOC107452690 0
LOC107448373 Ptep1.0/2.0 NW_024970018.1 113853 133593 - biogenesis of lysosome-related organelles complex 1 subunit 6 aug3.g2177 LOC107448373 0
LOC107441011 Ptep1.0/2.0 NW_024970060.1 93606 113055 - outer dynein arm protein 1 aug3.g9788,aug3.g21777 LOC107441011 0
LOC107452689 Ptep1.0/2.0 NW_024970109.1 316127 366315 - ras and EF-hand domain-containing protein aug3.g21778,aug3.g24644,aug3.g20015 LOC107452689,LOC107443875 0
LOC122270272 Ptep1.0/2.0 NW_024970112.1 1216674 1217867 - uncharacterized LOC122270272 aug3.g6276,aug3.g8786,aug3.g14191,aug3.g22774,aug3.g7314,aug3.g20021,aug3.g19342,aug3.g20731,aug3.g21771,aug3.g5270,aug3.g15965,aug3.g8785 NA 0
LOC107452597 Ptep1.0/2.0 NW_024971605.1 3873 24934 - uveal autoantigen with coiled-coil domains and ankyrin repeats-like aug3.g9788,aug3.g21776 LOC107452597 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02