Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448407 Ptep1.0/2.0 NW_024969838.1 405277 437717 - ras-related protein Rab-7L1 aug3.g2201 LOC107448407 0
LOC107439995 Ptep1.0/2.0 NW_024969988.1 2355026 2355898 - general transcription factor II-I repeat domain-containing protein 2B-like aug3.g44,aug3.g19402,aug3.g14377,aug3.g22016,aug3.g22277,aug3.g20287 LOC107439995 0
LOC107449337 Ptep1.0/2.0 NW_024970471.1 519878 547105 + serine/threonine-protein kinase Pink1, mitochondrial aug3.g2713,aug3.g2714,aug3.g22010 LOC107449337,LOC107453833 0
LOC107453889 Ptep1.0/2.0 NW_024971009.1 229 7332 + uncharacterized LOC107453889 aug3.g22019 LOC107453889 0
LOC107450527 Ptep1.0/2.0 NW_024971042.1 185040 202805 + putative carbonic anhydrase 3 aug3.g3408,aug3.g22012 LOC107450527 0
5 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02