Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446482 Ptep1.0/2.0 NW_024969627.1 1520708 1606810 + uncharacterized LOC107446482 aug3.g19199,aug3.g22087,aug3.g22088 LOC107446482 0
LOC107438087 Ptep1.0/2.0 NW_024969772.1 2309 18710 - zinc metalloproteinase nas-36 aug3.g12811,aug3.g22086 LOC107438087 0
LOC107448405 Ptep1.0/2.0 NW_024969838.1 876254 885668 + apolipoprotein D aug3.g2208 LOC107448405 0
LOC107454216 Ptep1.0/2.0 NW_024969911.1 577975 781227 - uncharacterized LOC107454216 aug3.g22085 LOC107445621,LOC107454216 0
LOC122270475 Ptep1.0/2.0 NW_024970199.1 213438 214471 + uncharacterized LOC122270475 aug3.g12083,aug3.g22080 NA 0
LOC122268366 Ptep1.0/2.0 NW_024970316.1 2651 20034 + zinc metalloproteinase nas-36-like aug3.g22086 NA 0
LOC107454232 Ptep1.0/2.0 NW_024972555.1 8162 19361 + probable H/ACA ribonucleoprotein complex subunit 1 aug3.g22089 LOC107454232 0
LOC122273063 Ptep1.0/2.0 NW_024973903.1 946 6515 + uncharacterized LOC122273063 aug3.g22081 NA 2e-65
LOC122273650 Ptep1.0/2.0 NW_024978141.1 7 2160 - uncharacterized LOC122273650 aug3.g22085 NA 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02