Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448457 Ptep1.0/2.0 NW_024969636.1 1439878 1447928 - translation initiation factor eIF-2B subunit beta aug3.g2223 LOC107448457 0
LOC107455862 Ptep1.0/2.0 NW_024969764.1 437310 438215 - uncharacterized LOC107455862 aug3.g25146,aug3.g19343,aug3.g16463,aug3.g14400,aug3.g4758,aug3.g3610,aug3.g22235,aug3.g11358,aug3.g1785,aug3.g25419 LOC107455862 0
LOC107436231 Ptep1.0/2.0 NW_024970552.1 41327 91253 + secernin-3 aug3.g11415,aug3.g22232 LOC107436231 0
LOC107440644 Ptep1.0/2.0 NW_024971474.1 56521 73693 - D-2-hydroxyglutarate dehydrogenase, mitochondrial aug3.g14707,aug3.g22233 LOC107440644 0
LOC107442799 Ptep1.0/2.0 NW_024971508.1 28174 71864 - phosphatidylcholine translocator ABCB4-like aug3.g21720,aug3.g16833,aug3.g5427,aug3.g5428,aug3.g20796,aug3.g22230,aug3.g20215 LOC107442799 0
LOC107454985 Ptep1.0/2.0 NW_024975446.1 907 5828 - D-2-hydroxyglutarate dehydrogenase, mitochondrial-like aug3.g22233 LOC107454985 0
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02