Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448462 Ptep1.0/2.0 NW_024969636.1 1377721 1398871 - galactose-1-phosphate uridylyltransferase aug3.g2227 LOC107448462 0
LOC107451266 Ptep1.0/2.0 NW_024969701.1 1264272 1294490 + E3 ubiquitin-protein ligase RFWD3 aug3.g25400,aug3.g22272 LOC107451266 0
LOC107455317 Ptep1.0/2.0 NW_024969817.1 724630 752149 - ubiquitin-conjugating enzyme E2 Q1-like aug3.g22274,aug3.g12911 LOC107438218,LOC107455317 0
LOC107449886 Ptep1.0/2.0 NW_024969886.1 156090 166085 - uncharacterized LOC107449886 aug3.g15512,aug3.g22278 LOC107449886 0
LOC107439995 Ptep1.0/2.0 NW_024969988.1 2355026 2355898 - general transcription factor II-I repeat domain-containing protein 2B-like aug3.g44,aug3.g19402,aug3.g14377,aug3.g22016,aug3.g22277,aug3.g20287 LOC107439995 0
LOC107446173 Ptep1.0/2.0 NW_024970296.1 339071 384421 + small G protein signaling modulator 1 aug3.g18977,aug3.g22280,aug3.g20105,aug3.g22279 LOC107446173 0
LOC107442724 Ptep1.0/2.0 NW_024971162.1 118898 129410 - ras-related protein Rab-43-like aug3.g22271 LOC107442724 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02