Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107441450 Ptep1.0/2.0 NW_024969627.1 654696 743171 - proto-oncogene tyrosine-protein kinase ROS aug3.g9836,aug3.g22581 LOC107441450 0
LOC107438439 Ptep1.0/2.0 NW_024970129.1 272693 279825 - 60S ribosomal protein L30 aug3.g8051,aug3.g22587 LOC107455806,LOC107438439 0
LOC122270301 Ptep1.0/2.0 NW_024970129.1 277760 279646 - uncharacterized LOC122270301 aug3.g22587 NA 2e-31
LOC107440063 Ptep1.0/2.0 NW_024970149.1 38585 65940 - pre-mRNA-splicing factor CWC25 homolog aug3.g14233,aug3.g22582 LOC107437587,LOC107440063 0
LOC107450032 Ptep1.0/2.0 NW_024970640.1 168739 194821 + fatty-acid amide hydrolase 2-A aug3.g21046,aug3.g22580,aug3.g26102 LOC107450032 0
LOC122272072 Ptep1.0/2.0 NW_024971461.1 10758 16380 + uncharacterized LOC122272072 aug3.g25703,aug3.g22588 LOC107450642 0
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02