Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446190 Ptep1.0/2.0 NW_024969882.1 647243 662132 + GMP reductase 2 aug3.g10169,aug3.g22636 LOC107441295,LOC107446190 0
LOC107455471 Ptep1.0/2.0 NW_024970405.1 52954 91858 - ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial aug3.g10881,aug3.g13202,aug3.g22637 LOC107441302,LOC107455471 0
LOC107449250 Ptep1.0/2.0 NW_024970820.1 130448 175071 - synaptojanin-1 aug3.g20655,aug3.g26676,aug3.g22631 LOC107449250 0
LOC107448506 Ptep1.0/2.0 NW_024970824.1 110768 134767 + coiled-coil domain-containing protein 85C aug3.g2263 LOC107448506 0
LOC107440804 Ptep1.0/2.0 NW_024971041.1 117011 151399 - N-alpha-acetyltransferase 35, NatC auxiliary subunit aug3.g14837,aug3.g22633 LOC107440804,LOC107441161 0
LOC122272914 Ptep1.0/2.0 NW_024973289.1 220 9032 - neurofilament heavy polypeptide-like aug3.g22638 NA 7e-130
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02