Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448557 Ptep1.0/2.0 NW_024969842.1 1287642 1368876 - probable G-protein coupled receptor 158 aug3.g2280 LOC107448557 0
LOC107452752 Ptep1.0/2.0 NW_024969963.1 564523 594276 + isocitrate dehydrogenase [NADP], mitochondrial aug3.g4961,aug3.g22801 LOC107452752 0
LOC107437761 Ptep1.0/2.0 NW_024969975.1 466465 467922 - uncharacterized LOC107437761 aug3.g12560,aug3.g10934,aug3.g2369,aug3.g18156,aug3.g27665,aug3.g13554,aug3.g16210,aug3.g22807,aug3.g17498 LOC107437761 0
LOC107455999 Ptep1.0/2.0 NW_024970274.1 14097 26485 - paired box protein Pax-1-like aug3.g22809 LOC107455999 0
LOC122273504 Ptep1.0/2.0 NW_024976751.1 615 1161 - transcription initiation factor TFIID subunit 12-like aug3.g22803 NA 0
5 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02