Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448579 Ptep1.0/2.0 NW_024969842.1 365543 392829 + meiosis-specific coiled-coil domain-containing protein MEIOC aug3.g2294 LOC107448579 0
LOC107450327 Ptep1.0/2.0 NW_024970127.1 139778 237540 + murinoglobulin-1 aug3.g3268,aug3.g22944 LOC107450327,LOC107436634 0
LOC107445034 Ptep1.0/2.0 NW_024970138.1 123696 124985 - probable glutamate receptor aug3.g7479,aug3.g13983,aug3.g7480,aug3.g22940,aug3.g21656 LOC107445034 0
LOC107436663 Ptep1.0/2.0 NW_024970294.1 249860 254464 - uncharacterized LOC107436663 aug3.g305,aug3.g22949 LOC107436663,LOC110282930 0
LOC122272096 Ptep1.0/2.0 NW_024971493.1 41088 42617 - zinc finger MYM-type protein 1-like aug3.g22948 NA 0
LOC107436627 Ptep1.0/2.0 NW_024971603.1 5048 5380 - histone H2A-beta, sperm-like aug3.g22941 LOC107436627 7e-176
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02