Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107437524 Ptep1.0/2.0 NW_024969708.1 3477144 3495407 + homeobox protein HMX3-B-like aug3.g26282,aug3.g23073 LOC107437524 0
LOC107451423 Ptep1.0/2.0 NW_024969865.1 530797 648333 + hemicentin-1 aug3.g15713,aug3.g23075 LOC107451424,LOC107451423,LOC107437848 0
LOC107448643 Ptep1.0/2.0 NW_024970354.1 125607 142420 + protein disulfide-isomerase A6 homolog aug3.g2307 LOC107448643 0
LOC122271602 Ptep1.0/2.0 NW_024970971.1 87165 87695 - uncharacterized LOC122271602 aug3.g23078 NA 0
LOC107447755 Ptep1.0/2.0 NW_024971253.1 38522 111289 - uncharacterized LOC107447755 aug3.g23076,aug3.g19950,aug3.g26462,aug3.g19951,aug3.g19949,aug3.g19947,aug3.g23507,aug3.g20843 LOC107447755 0
LOC107437902 Ptep1.0/2.0 NW_024971348.1 21334 47325 - A disintegrin and metalloproteinase with thrombospondin motifs adt-1-like aug3.g23077,aug3.g17728 LOC107437902 0
LOC122273450 Ptep1.0/2.0 NW_024976190.1 7 4753 + hemicentin-1-like aug3.g23075 LOC107451423 0
LOC122273730 Ptep1.0/2.0 NW_024979213.1 7 2783 + A disintegrin and metalloproteinase with thrombospondin motifs adt-1-like aug3.g23077 NA 3e-144
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02