Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107454154 Ptep1.0/2.0 NW_024969641.1 997292 1010901 + probable RNA polymerase II nuclear localization protein SLC7A6OS aug3.g23157,aug3.g23960 LOC107454154,LOC107438697 0
LOC107448641 Ptep1.0/2.0 NW_024970023.1 369053 398614 - uncharacterized LOC107448641 aug3.g2315 LOC107448641 0
LOC107441820 Ptep1.0/2.0 NW_024970037.1 254980 279456 - uncharacterized LOC107441820 aug3.g16165,aug3.g23150 LOC107441820 0
LOC107454268 Ptep1.0/2.0 NW_024970100.1 7609 34625 - E3 ubiquitin-protein ligase rnf146 aug3.g23151,aug3.g23983 LOC107454268,LOC107438643 0
4 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02