Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444108 Ptep1.0/2.0 NW_024969605.1 240427 255251 + leucine-rich repeat-containing protein 70 aug3.g17626,aug3.g23293 LOC107444108 0
LOC107436945 Ptep1.0/2.0 NW_024969633.1 940276 982924 + glutamate receptor 1 aug3.g7043,aug3.g23291 LOC107439939,LOC107436945 0
LOC107447029 Ptep1.0/2.0 NW_024969668.1 1108568 1137661 + pyruvate kinase PKM aug3.g7636,aug3.g7637,aug3.g23215 LOC107439302,LOC107447029 0
LOC122269109 Ptep1.0/2.0 NW_024969740.1 501907 502209 + uncharacterized LOC122269109 aug3.g23230 NA 1e-128
LOC122269114 Ptep1.0/2.0 NW_024969741.1 937252 939493 + piggyBac transposable element-derived protein 4-like aug3.g13055,aug3.g5718,aug3.g10795,aug3.g23275 NA 0
LOC107448640 Ptep1.0/2.0 NW_024969804.1 302083 343582 + obg-like ATPase 1 aug3.g2327 LOC107448640 0
LOC107448644 Ptep1.0/2.0 NW_024969804.1 353034 374158 - transcription factor Sp4 aug3.g2326 LOC107448644 0
LOC107437747 Ptep1.0/2.0 NW_024969862.1 279828 294027 + speckle-type POZ protein aug3.g12545,aug3.g23273 LOC107437747 0
LOC107457287 Ptep1.0/2.0 NW_024969871.1 727679 779447 + ras-related protein ced-10-like aug3.g14102,aug3.g23225,aug3.g11036,aug3.g14101 LOC107439402,LOC107457287 0
LOC107439349 Ptep1.0/2.0 NW_024969900.1 153808 160715 + cold and drought-regulated protein CORA aug3.g23220 LOC107439349 1e-159
LOC107448638 Ptep1.0/2.0 NW_024970023.1 1885 26637 - uncharacterized LOC107448638 aug3.g2325 LOC107448638 0
LOC107448656 Ptep1.0/2.0 NW_024970023.1 46577 58834 - cytosolic 5'-nucleotidase 3 aug3.g2324 LOC107448656 0
LOC107448655 Ptep1.0/2.0 NW_024970023.1 78444 231659 + BMP-binding endothelial regulator protein aug3.g2323 LOC107448655 0
LOC107448659 Ptep1.0/2.0 NW_024970023.1 236683 250245 - transmembrane protein 134 aug3.g2322 LOC107448659 0
LOC107448648 Ptep1.0/2.0 NW_024970023.1 250425 267718 + polymerase delta-interacting protein 2 aug3.g2321 LOC107448648 0
LOC107448649 Ptep1.0/2.0 NW_024970023.1 276878 294718 - deubiquitinase DESI2 aug3.g2320 LOC107448649 0
LOC107456777 Ptep1.0/2.0 NW_024970043.1 148085 169070 - limulus clotting factor C aug3.g8819,aug3.g23266 LOC107456777 0
LOC122270123 Ptep1.0/2.0 NW_024970062.1 1350308 1350823 - uncharacterized LOC122270123 aug3.g322,aug3.g24982,aug3.g21347,aug3.g19154,aug3.g18410,aug3.g9789,aug3.g24140,aug3.g5789,aug3.g9585,aug3.g17955,aug3.g10075,aug3.g27721,aug3.g23282,aug3.g20842,aug3.g585,aug3.g19946,aug3.g25069 NA 0
LOC107455391 Ptep1.0/2.0 NW_024970145.1 193478 216954 - heterogeneous nuclear ribonucleoprotein K aug3.g23247,aug3.g7719,aug3.g7718 LOC107439617,LOC107455391 0
LOC107450464 Ptep1.0/2.0 NW_024970196.1 466295 466915 - protein FAM166B-like aug3.g23238,aug3.g15589 LOC107450464 0
LOC107445597 Ptep1.0/2.0 NW_024970198.1 178439 226022 + acetoacetyl-CoA synthetase-like aug3.g1094,aug3.g23298 LOC107445597,LOC107439980 0
LOC107436905 Ptep1.0/2.0 NW_024970255.1 72326 105211 - tetratricopeptide repeat protein 28 aug3.g11916,aug3.g23227 LOC107436905 0
LOC107451016 Ptep1.0/2.0 NW_024970397.1 16276 158040 + histone lysine acetyltransferase CREBBP aug3.g232 LOC107451016 0
LOC107439426 Ptep1.0/2.0 NW_024970439.1 244338 263920 - degenerin deg-1-like aug3.g23228,aug3.g19986 LOC107439426 0
LOC122270902 Ptep1.0/2.0 NW_024970439.1 263667 269222 - uncharacterized LOC122270902 aug3.g23228 NA 9e-168
LOC107441892 Ptep1.0/2.0 NW_024970519.1 68496 195208 + agrin-like aug3.g16233,aug3.g23217 LOC107441892 0
LOC122271033 Ptep1.0/2.0 NW_024970524.1 136811 157024 + probable serine/threonine-protein kinase DDB_G0277449 aug3.g13265,aug3.g23260,aug3.g6646 NA 0
LOC122271115 Ptep1.0/2.0 NW_024970577.1 279341 279676 - uncharacterized LOC122271115 aug3.g23230 NA 7e-171
LOC107453950 Ptep1.0/2.0 NW_024970629.1 103711 126085 + aquaporin AQPAe.a-like aug3.g23923,aug3.g23280 LOC107439797,LOC107453950 0
LOC107449396 Ptep1.0/2.0 NW_024970702.1 273440 279700 - glutamine synthetase cytosolic isozyme-like aug3.g8229,aug3.g20724,aug3.g16280,aug3.g23216 LOC107449396 0
LOC107456077 Ptep1.0/2.0 NW_024970773.1 153233 180427 + centrosomal protein of 120 kDa aug3.g10933,aug3.g23206 LOC107456077,LOC107439211 0
LOC107453399 Ptep1.0/2.0 NW_024970839.1 190585 191382 + uncharacterized LOC107453399 aug3.g5455,aug3.g23285 LOC107453399 0
LOC107438227 Ptep1.0/2.0 NW_024971017.1 2646 35159 - pseudogene aug3.g9797,aug3.g23231 LOC107443923,LOC107438227 0
LOC122271868 Ptep1.0/2.0 NW_024971242.1 63674 64929 - uncharacterized LOC122271868 aug3.g25043,aug3.g23223 NA 0
LOC122272575 Ptep1.0/2.0 NW_024972279.1 25401 27725 - uncharacterized LOC122272575 aug3.g18500,aug3.g1055,aug3.g23274 NA 0
LOC107439719 Ptep1.0/2.0 NW_024972586.1 7452 13817 + U3-aranetoxin-Ce1a-like aug3.g23268 LOC107439719 3e-101
LOC107449645 Ptep1.0/2.0 NW_024973094.1 7729 8787 - TD and POZ domain-containing protein 3-like aug3.g23259 LOC107449645 0
LOC122273872 Ptep1.0/2.0 NW_024982098.1 723 2472 + uncharacterized LOC122273872 aug3.g14240,aug3.g23241 NA 0
LOC107439678 Ptep1.0/2.0 NW_024984574.1 553 1463 + speckle-type POZ protein-like aug3.g23259,aug3.g20853,aug3.g20852,aug3.g4024,aug3.g19293,aug3.g4025,aug3.g21005,aug3.g19294 LOC107439678 0
LOC122273996 Ptep1.0/2.0 NW_024986197.1 45 461 + speckle-type POZ protein-like aug3.g23273 LOC107439764 0
LOC122268556 Ptep1.0/2.0 NW_025001281.1 432 769 + uncharacterized LOC122268556 aug3.g23230 NA 1e-163
41 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02