Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448668 Ptep1.0/2.0 NW_024969680.1 1560126 1658847 + prolyl 4-hydroxylase subunit alpha-1 aug3.g2341,aug3.g2340 LOC107448668,LOC107454999 0
LOC107447647 Ptep1.0/2.0 NW_024969905.1 197086 246349 - kinesin-like protein KIF11-B aug3.g19893,aug3.g19868,aug3.g23405 LOC110281929,LOC107447647 0
LOC122271000 Ptep1.0/2.0 NW_024970497.1 226025 227904 + uncharacterized LOC122271000 aug3.g23408 NA 1e-140
LOC122272400 Ptep1.0/2.0 NW_024971952.1 17498 24679 + uncharacterized LOC122272400 aug3.g23408 NA 0
LOC122273754 Ptep1.0/2.0 NW_024979677.1 946 1765 - uncharacterized LOC122273754 aug3.g23408 NA 7e-124
LOC122273983 Ptep1.0/2.0 NW_024985863.1 889 1503 + cuticle protein 16.5-like aug3.g23403 NA 5e-89
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02