Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107452127 Ptep1.0/2.0 NW_024969678.1 157706 176841 + zinc finger protein 570 aug3.g23550,aug3.g23549 LOC107452127 0
LOC107452137 Ptep1.0/2.0 NW_024969678.1 185181 211359 - SRSF protein kinase 3 aug3.g23551 LOC107452137 0
LOC107452146 Ptep1.0/2.0 NW_024969678.1 226472 230694 - RNA-binding protein spenito-like aug3.g23552 LOC107452146 0
LOC107452142 Ptep1.0/2.0 NW_024969678.1 230867 262237 + ER degradation-enhancing alpha-mannosidase-like protein 1 aug3.g23553 LOC107452142 0
LOC107452125 Ptep1.0/2.0 NW_024969678.1 269078 303030 + uncharacterized LOC107452125 aug3.g23555 LOC107452125 0
LOC107452143 Ptep1.0/2.0 NW_024969678.1 313218 323390 + uncharacterized LOC107452143 aug3.g23556 LOC107452143 0
LOC107452145 Ptep1.0/2.0 NW_024969678.1 338907 353615 + beta-parvin aug3.g23557 LOC107452145 0
LOC107452128 Ptep1.0/2.0 NW_024969678.1 355854 456163 - potassium voltage-gated channel subfamily KQT member 1 aug3.g23558,aug3.g22567 LOC107452128 0
LOC107452129 Ptep1.0/2.0 NW_024969678.1 458934 543917 - sodium- and chloride-dependent glycine transporter 2-like aug3.g23559 LOC107452129 0
LOC107448686 Ptep1.0/2.0 NW_024969946.1 54650 79350 - zinc finger protein 62 homolog aug3.g2355,aug3.g2356,aug3.g2357 LOC107448686,LOC107448694 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02