Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448728 Ptep1.0/2.0 NW_024969616.1 1075671 1090408 - voltage-gated hydrogen channel 1 aug3.g2377,aug3.g2376 LOC107448728 0
LOC107453354 Ptep1.0/2.0 NW_024969770.1 1284665 1285111 - uncharacterized LOC107453354 aug3.g23779 LOC107453354 0
LOC107453353 Ptep1.0/2.0 NW_024969770.1 1320433 1333422 - protein extra-macrochaetae aug3.g23777 LOC107453353 0
LOC107453362 Ptep1.0/2.0 NW_024969770.1 1350258 1415411 - uncharacterized LOC107453362 aug3.g23776 LOC107453362 0
LOC107453366 Ptep1.0/2.0 NW_024969770.1 1437698 1468100 + pyruvate kinase PKM aug3.g23775 LOC107453366 0
LOC122270435 Ptep1.0/2.0 NW_024970183.1 571563 623920 - E3 ubiquitin-protein ligase HECTD1-like aug3.g23772 LOC107453213 0
LOC107453213 Ptep1.0/2.0 NW_024970861.1 4743 101032 - E3 ubiquitin-protein ligase HECTD1 aug3.g23772 LOC107453213 0
LOC107453215 Ptep1.0/2.0 NW_024970861.1 117834 187098 - cyclin-dependent kinase-like 4 aug3.g23773,aug3.g23774 LOC107453215 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02