Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448739 Ptep1.0/2.0 NW_024969616.1 1381829 1427418 - 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase classes I and II aug3.g2386 LOC107448739 0
LOC122268861 Ptep1.0/2.0 NW_024969690.1 73827 235821 + uncharacterized LOC122268861 aug3.g23864 NA 3e-52
LOC107453691 Ptep1.0/2.0 NW_024969690.1 215315 300131 - neuroligin-4, X-linked aug3.g23864 LOC107453691 0
LOC107453683 Ptep1.0/2.0 NW_024969690.1 548238 623731 - uncharacterized LOC107453683 aug3.g23871,aug3.g23873,aug3.g23872,aug3.g22684,aug3.g23868,aug3.g23869 LOC107453683 0
LOC122269383 Ptep1.0/2.0 NW_024969803.1 28551 35620 + uncharacterized LOC122269383 aug3.g23860 NA 0
LOC107453209 Ptep1.0/2.0 NW_024970183.1 529921 530361 + uncharacterized LOC107453209 aug3.g3476,aug3.g23861,aug3.g11787 LOC107453209 0
LOC122270560 Ptep1.0/2.0 NW_024970244.1 338870 350726 - uncharacterized LOC122270560 aug3.g555,aug3.g27021,aug3.g3303,aug3.g24086,aug3.g25561,aug3.g25737,aug3.g11378,aug3.g26737,aug3.g23862,aug3.g13207,aug3.g25176,aug3.g23432,aug3.g27815,aug3.g4200,aug3.g26053,aug3.g25031,aug3.g24630,aug3.g22423,aug3.g17890,aug3.g15308,aug3.g6826,aug3.g22 NA 0
LOC107453682 Ptep1.0/2.0 NW_024971153.1 2176 2892 + uncharacterized LOC107453682 aug3.g23861 LOC107453682 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02