Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107453798 Ptep1.0/2.0 NW_024969604.1 560114 585200 - protein ABHD11 aug3.g23899 LOC107453798 0
LOC107453789 Ptep1.0/2.0 NW_024969604.1 597630 618440 - alpha-scruin-like aug3.g23899 LOC107453789 0
LOC122269125 Ptep1.0/2.0 NW_024969604.1 619473 627061 - kelch repeat and BTB domain-containing protein 8-like aug3.g23899 LOC107453789 0
LOC107453808 Ptep1.0/2.0 NW_024969604.1 632562 650840 + 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 aug3.g23898 LOC107453808 0
LOC107453790 Ptep1.0/2.0 NW_024969604.1 652888 658464 - intraflagellar transport protein 25 homolog aug3.g23897 LOC107453790 0
LOC107453809 Ptep1.0/2.0 NW_024969604.1 658596 683381 + targeting protein for Xklp2 aug3.g23896 LOC107453809 0
LOC107453791 Ptep1.0/2.0 NW_024969604.1 685392 689938 - uncharacterized LOC107453791 aug3.g23895 LOC107453791 0
LOC107453813 Ptep1.0/2.0 NW_024969604.1 695589 708702 + uncharacterized LOC107453813 aug3.g23894 LOC107453813 0
LOC122269131 Ptep1.0/2.0 NW_024969604.1 783796 1318050 - cytosolic carboxypeptidase 6-like aug3.g23892 NA 0
LOC107448735 Ptep1.0/2.0 NW_024969616.1 1441167 1486068 - transforming growth factor-beta-induced protein ig-h3-like aug3.g2389 LOC107448735 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02