Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107453805 Ptep1.0/2.0 NW_024969604.1 276986 291447 + holocytochrome c-type synthase aug3.g23909 LOC107453805 0
LOC107453795 Ptep1.0/2.0 NW_024969604.1 299116 382822 + polypyrimidine tract-binding protein 1 aug3.g23907,aug3.g23906 LOC107453795 0
LOC107453803 Ptep1.0/2.0 NW_024969604.1 391269 462073 + kinesin-like protein KIF21B aug3.g23905 LOC107453803 0
LOC107453799 Ptep1.0/2.0 NW_024969604.1 465235 477695 - cytoskeleton-associated protein 5 aug3.g23904,aug3.g23905 LOC107453799 0
LOC107453812 Ptep1.0/2.0 NW_024969604.1 479886 493273 - tRNA wybutosine-synthesizing protein 2 homolog aug3.g23903 LOC107453812 0
LOC107453807 Ptep1.0/2.0 NW_024969604.1 499092 509930 - myophilin aug3.g23902 LOC107453807 0
LOC107453797 Ptep1.0/2.0 NW_024969604.1 530263 559639 + pre-mRNA-processing factor 6 aug3.g23900 LOC107453797 0
LOC107448772 Ptep1.0/2.0 NW_024970002.1 553708 567414 + uncharacterized LOC107448772 aug3.g2390,aug3.g2391 LOC107448772 0
LOC122270431 Ptep1.0/2.0 NW_024970181.1 189 4353 + uncharacterized LOC122270431 aug3.g23906 NA 1e-164
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02