Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107454055 Ptep1.0/2.0 NW_024969902.1 212923 222997 - BTB/POZ domain-containing protein At2g30600 aug3.g23948,aug3.g23925,aug3.g15988 LOC107454055 0
LOC107449307 Ptep1.0/2.0 NW_024969926.1 678454 725129 - vigilin aug3.g2677,aug3.g21599,aug3.g22222,aug3.g23922 LOC107449307,LOC107451789 0
LOC107440254 Ptep1.0/2.0 NW_024970062.1 457602 466201 + protein ABHD11 aug3.g9728,aug3.g9726,aug3.g20277,aug3.g9725,aug3.g23929 LOC107440254 0
LOC107454052 Ptep1.0/2.0 NW_024970462.1 264094 288435 - uncharacterized LOC107454052 aug3.g23926 LOC107454052 0
LOC107455206 Ptep1.0/2.0 NW_024970462.1 306958 315300 + protein ABHD11-like aug3.g23929 LOC107455206 0
LOC122268267 Ptep1.0/2.0 NW_024970462.1 325404 333529 + protein ABHD11-like aug3.g23929 LOC107454051 0
LOC122271088 Ptep1.0/2.0 NW_024970550.1 11827 14170 - uncharacterized LOC122271088 aug3.g23920 NA 0
LOC107453938 Ptep1.0/2.0 NW_024970555.1 524067 528014 - zinc finger protein 808 aug3.g23920,aug3.g11926 LOC107453938 0
LOC107453943 Ptep1.0/2.0 NW_024970629.1 1989 11694 + homeobox protein caupolican aug3.g23924 LOC107453943 0
LOC107453942 Ptep1.0/2.0 NW_024970629.1 18783 22535 + uncharacterized LOC107453942 aug3.g23924 LOC107453942 0
LOC122271184 Ptep1.0/2.0 NW_024970629.1 83412 94757 + uncharacterized LOC122271184 aug3.g23923 NA 4e-157
LOC107453950 Ptep1.0/2.0 NW_024970629.1 103711 126085 + aquaporin AQPAe.a-like aug3.g23923,aug3.g23280 LOC107439797,LOC107453950 0
LOC107453945 Ptep1.0/2.0 NW_024970629.1 130781 174383 - coatomer subunit gamma-2 aug3.g23922 LOC107453945 0
LOC107453939 Ptep1.0/2.0 NW_024970629.1 193290 276054 + metalloprotease TIKI2 aug3.g23921,aug3.g21917 LOC107453939,LOC107453319 0
LOC107457123 Ptep1.0/2.0 NW_024971055.1 76476 108803 - uncharacterized LOC107457123 aug3.g23922 LOC107457123 5e-132
LOC110283429 Ptep1.0/2.0 NW_024971142.1 34086 45226 - uncharacterized LOC110283429 aug3.g23922 LOC110283429 2e-51
LOC122272506 Ptep1.0/2.0 NW_024972142.1 2350 6052 - uncharacterized LOC122272506 aug3.g23922 NA 1e-125
LOC107453535 Ptep1.0/2.0 NW_024972553.1 2082 21509 + uncharacterized LOC107453535 aug3.g23922,aug3.g10734 LOC107453535 2e-152
LOC107454051 Ptep1.0/2.0 NW_024972629.1 8430 16778 - protein ABHD11 aug3.g23929 LOC107454051 0
LOC122273105 Ptep1.0/2.0 NW_024974142.1 413 2596 + uncharacterized LOC122273105 aug3.g23922 NA 4e-76
LOC122273844 Ptep1.0/2.0 NW_024981579.1 92 1474 - uncharacterized LOC122273844 aug3.g23922 LOC107453945 2e-177
21 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02