Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446265 Ptep1.0/2.0 NW_024969609.1 7978 314412 - nesprin-1 aug3.g1291,aug3.g1289,aug3.g24162,aug3.g24562,aug3.g1292,aug3.g24179,aug3.g15792 LOC107446265,LOC107441794 0
LOC107450823 Ptep1.0/2.0 NW_024969611.1 663878 714566 + uncharacterized LOC107450823 aug3.g15626,aug3.g24171 LOC107450823 0
LOC107437797 Ptep1.0/2.0 NW_024969615.1 2044528 2048038 - alpha-latrocrustotoxin-Lt1a-like aug3.g26321,aug3.g13261,aug3.g24167 LOC107437797 0
LOC107451722 Ptep1.0/2.0 NW_024969643.1 2637296 2641383 + gastrula zinc finger protein XlCGF71.1-like aug3.g24106 LOC107451722 7e-106
LOC107456826 Ptep1.0/2.0 NW_024969653.1 268460 274876 + zinc finger protein SNAI2 aug3.g8862,aug3.g24175 LOC107456826 0
LOC122268903 Ptep1.0/2.0 NW_024969701.1 1248926 1255058 + uncharacterized LOC122268903 aug3.g25401,aug3.g14099,aug3.g5419,aug3.g18854,aug3.g21120,aug3.g24107,aug3.g17828 NA 0
LOC107436395 Ptep1.0/2.0 NW_024969724.1 63746 64360 - SCAN domain-containing protein 3-like aug3.g24187,aug3.g12021 LOC107436395 0
LOC107454766 Ptep1.0/2.0 NW_024969730.1 477360 524223 + dopamine receptor 1 aug3.g24124 LOC107454766 0
LOC107454767 Ptep1.0/2.0 NW_024969730.1 583920 597042 - translocon-associated protein subunit gamma aug3.g24121 LOC107454767 0
LOC107454757 Ptep1.0/2.0 NW_024969730.1 597109 613182 + transmembrane protein 198 aug3.g24120 LOC107454757 0
LOC107454762 Ptep1.0/2.0 NW_024969730.1 615014 624598 - proteasome subunit beta type-1 aug3.g24119 LOC107454762 0
LOC107454764 Ptep1.0/2.0 NW_024969730.1 624603 632333 + uncharacterized LOC107454764 aug3.g24118 LOC107454764 0
LOC107454760 Ptep1.0/2.0 NW_024969730.1 633181 756431 - ankyrin repeat domain-containing protein 6 aug3.g24117 LOC107454760 0
LOC107454756 Ptep1.0/2.0 NW_024969730.1 771228 775800 + vesicle transport through interaction with t-SNAREs homolog 1B aug3.g24116 LOC107454756 0
LOC107454755 Ptep1.0/2.0 NW_024969730.1 778529 881328 - cytoplasmic dynein 2 heavy chain 1-like aug3.g24115 LOC107454755,LOC110282644 0
LOC107454758 Ptep1.0/2.0 NW_024969730.1 881481 944167 + sister chromatid cohesion protein PDS5 homolog A aug3.g24114,aug3.g2952 LOC107454758 0
LOC107454765 Ptep1.0/2.0 NW_024969730.1 962635 981882 + DNA helicase MCM9 aug3.g24113 LOC107454765 0
LOC107454759 Ptep1.0/2.0 NW_024969730.1 984690 1147042 - LARGE xylosyl- and glucuronyltransferase 1 aug3.g24112 LOC107454759 0
LOC107454654 Ptep1.0/2.0 NW_024969742.1 35899 63052 + uncharacterized LOC107454654 aug3.g24106 LOC107454654 0
LOC107454653 Ptep1.0/2.0 NW_024969742.1 129078 151105 + uncharacterized LOC107454653 aug3.g24105 LOC107454653 0
LOC107454659 Ptep1.0/2.0 NW_024969742.1 158412 179294 + uncharacterized LOC107454659 aug3.g24104 LOC107454659 0
LOC107454650 Ptep1.0/2.0 NW_024969742.1 182290 196658 - protein FAM92A aug3.g24102 LOC107454650 0
LOC107454649 Ptep1.0/2.0 NW_024969742.1 196930 254582 + calcium-transporting ATPase type 2C member 1 aug3.g24101 LOC107454649 0
LOC107454658 Ptep1.0/2.0 NW_024969742.1 260583 269987 - small nuclear ribonucleoprotein-associated protein B aug3.g24100 LOC107454658 0
LOC107451036 Ptep1.0/2.0 NW_024969780.1 4058440 4076885 + uncharacterized LOC107451036 aug3.g241 LOC107451036 0
LOC107443832 Ptep1.0/2.0 NW_024969808.1 208906 240775 - putative sodium-dependent multivitamin transporter aug3.g17497,aug3.g24170 LOC107443832 0
LOC107441893 Ptep1.0/2.0 NW_024969823.1 1717036 1803416 - paired box protein Pax-6 aug3.g19451,aug3.g24194,aug3.g22155,aug3.g19881 LOC107446875,LOC107447639,LOC107441893 0
LOC107444570 Ptep1.0/2.0 NW_024969889.1 781166 854212 - aquaporin-9 aug3.g10061,aug3.g24198 LOC107444570 0
LOC107441533 Ptep1.0/2.0 NW_024969929.1 517442 531834 - uncharacterized LOC107441533 aug3.g27323,aug3.g24161 LOC107441657,LOC107441533 0
LOC122269812 Ptep1.0/2.0 NW_024969941.1 355992 357902 - uncharacterized LOC122269812 aug3.g16123,aug3.g24142,aug3.g27812,aug3.g18507 NA 0
LOC107454871 Ptep1.0/2.0 NW_024969958.1 293048 358288 - hemicentin-2 aug3.g24139 LOC107454871 0
LOC107453969 Ptep1.0/2.0 NW_024969996.1 1270503 1272039 + uncharacterized LOC107453969 aug3.g5917,aug3.g24146 LOC107453969 0
LOC107448751 Ptep1.0/2.0 NW_024970002.1 1097 10838 + uncharacterized LOC107448751 aug3.g2412,aug3.g21556,aug3.g21557 LOC107448751 0
LOC107448760 Ptep1.0/2.0 NW_024970002.1 17837 22950 + uncharacterized LOC107448760 aug3.g2412 LOC107448760 0
LOC107448752 Ptep1.0/2.0 NW_024970002.1 24206 31902 + monocarboxylate transporter 7 aug3.g2412,aug3.g2411 LOC107448752 0
LOC122268221 Ptep1.0/2.0 NW_024970002.1 36282 45349 + monocarboxylate transporter 7-like aug3.g2411 LOC107448752 0
LOC107448767 Ptep1.0/2.0 NW_024970002.1 53640 76855 + monocarboxylate transporter 12-like aug3.g2410,aug3.g2409 LOC107448767 0
LOC122270123 Ptep1.0/2.0 NW_024970062.1 1350308 1350823 - uncharacterized LOC122270123 aug3.g322,aug3.g24982,aug3.g21347,aug3.g19154,aug3.g18410,aug3.g9789,aug3.g24140,aug3.g5789,aug3.g9585,aug3.g17955,aug3.g10075,aug3.g27721,aug3.g23282,aug3.g20842,aug3.g585,aug3.g19946,aug3.g25069 NA 0
LOC107448788 Ptep1.0/2.0 NW_024970148.1 124599 283805 + uncharacterized LOC107448788 aug3.g2414,aug3.g2415 LOC107448788 0
LOC107448790 Ptep1.0/2.0 NW_024970148.1 175449 179743 - uncharacterized LOC107448790 aug3.g2413 LOC107448790 0
LOC107448792 Ptep1.0/2.0 NW_024970148.1 336435 378710 + protein dopey homolog PFC0245c aug3.g2418,aug3.g2416 LOC107448792 0
LOC107448799 Ptep1.0/2.0 NW_024970148.1 389994 415529 - uncharacterized LOC107448799 aug3.g2419 LOC107448799 0
LOC107447117 Ptep1.0/2.0 NW_024970388.1 13503 32517 + UNC93-like protein aug3.g19553,aug3.g24190 LOC107447117 0
LOC107444896 Ptep1.0/2.0 NW_024970390.1 191121 248148 + uncharacterized LOC107444896 aug3.g10074,aug3.g24188 LOC107444896 0
LOC107454874 Ptep1.0/2.0 NW_024970455.1 84881 100805 - uncharacterized LOC107454874 aug3.g24150 LOC107454874 0
LOC107454880 Ptep1.0/2.0 NW_024970455.1 272599 362491 + hemicentin-2 aug3.g24148 LOC107454880 0
LOC107454873 Ptep1.0/2.0 NW_024970455.1 443356 443847 - uncharacterized LOC107454873 aug3.g24145 LOC107454873 0
LOC122271123 Ptep1.0/2.0 NW_024970583.1 497360 499696 + uncharacterized LOC122271123 aug3.g7928,aug3.g10162,aug3.g24384,aug3.g24138,aug3.g19522,aug3.g5485 NA 0
LOC107456085 Ptep1.0/2.0 NW_024970745.1 184298 240590 + uncharacterized LOC107456085 aug3.g8287,aug3.g9302,aug3.g17994,aug3.g26275,aug3.g18348,aug3.g24123,aug3.g8286,aug3.g11028,aug3.g25894,aug3.g10432,aug3.g27258,aug3.g15751,aug3.g2427 LOC107456085 0
LOC107450126 Ptep1.0/2.0 NW_024970833.1 24806 197601 - ubiquitin carboxyl-terminal hydrolase 34 aug3.g3140,aug3.g3138,aug3.g24193 LOC107441888,LOC107450126 0
LOC107454879 Ptep1.0/2.0 NW_024970876.1 5936 26218 + poly(A) RNA polymerase, mitochondrial aug3.g24133 LOC107454879 0
LOC122271493 Ptep1.0/2.0 NW_024970876.1 37158 41650 - oxysterol-binding protein-related protein 2-like aug3.g24132 LOC107454872 2e-111
LOC107454872 Ptep1.0/2.0 NW_024970876.1 45743 141188 - oxysterol-binding protein-related protein 2-like aug3.g24130 LOC107454872 0
LOC107454875 Ptep1.0/2.0 NW_024970876.1 126342 209798 + serine/threonine-protein kinase OSR1 aug3.g24127,aug3.g24128 LOC107454875 0
LOC107454877 Ptep1.0/2.0 NW_024970876.1 221504 251526 - LIM domain kinase 1 aug3.g24126 LOC107454877 0
LOC107453953 Ptep1.0/2.0 NW_024971089.1 32658 71290 + sister chromatid cohesion protein PDS5 homolog B aug3.g24114,aug3.g5900 LOC107453954,LOC107453953,LOC107453963 0
LOC122271718 Ptep1.0/2.0 NW_024971089.1 73625 85250 + serine-rich adhesin for platelets-like aug3.g24114 NA 0
LOC107441872 Ptep1.0/2.0 NW_024971493.1 4933 28571 + geranylgeranyl pyrophosphate synthase aug3.g24192 LOC107441872 0
LOC122272316 Ptep1.0/2.0 NW_024971772.1 1030 13147 - uncharacterized LOC122272316 aug3.g24156 NA 0
LOC107441598 Ptep1.0/2.0 NW_024971772.1 25433 45603 - uncharacterized LOC107441598 aug3.g24157 LOC107441598 0
LOC107446488 Ptep1.0/2.0 NW_024971801.1 30929 42838 - uncharacterized LOC107446488 aug3.g19213,aug3.g24156 LOC107446488 0
LOC122273088 Ptep1.0/2.0 NW_024974058.1 5777 8414 + uncharacterized LOC122273088 aug3.g24196 NA 3e-117
LOC107445610 Ptep1.0/2.0 NW_024977054.1 2639 3595 - uncharacterized LOC107445610 aug3.g18638,aug3.g24144 LOC107445610 0
LOC122273565 Ptep1.0/2.0 NW_024977243.1 2875 3880 - uncharacterized LOC122273565 aug3.g24143 NA 4e-111
LOC122273632 Ptep1.0/2.0 NW_024977933.1 106 2908 + uncharacterized LOC122273632 aug3.g24174 LOC107442185 3e-90
LOC122273860 Ptep1.0/2.0 NW_024981954.1 197 1044 - uncharacterized LOC122273860 aug3.g24113 LOC107454765 1e-58
LOC122273964 Ptep1.0/2.0 NW_024985038.1 77 1897 - uncharacterized LOC122273964 aug3.g24162 NA 0
LOC122268506 Ptep1.0/2.0 NW_024997023.1 51 722 - LARGE xylosyl- and glucuronyltransferase 2-like aug3.g24112 LOC107454759 6e-149
68 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02