Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107441893 Ptep1.0/2.0 NW_024969823.1 1717036 1803416 - paired box protein Pax-6 aug3.g19451,aug3.g24194,aug3.g22155,aug3.g19881 LOC107446875,LOC107447639,LOC107441893 0
LOC107444570 Ptep1.0/2.0 NW_024969889.1 781166 854212 - aquaporin-9 aug3.g10061,aug3.g24198 LOC107444570 0
LOC107448799 Ptep1.0/2.0 NW_024970148.1 389994 415529 - uncharacterized LOC107448799 aug3.g2419 LOC107448799 0
LOC107447117 Ptep1.0/2.0 NW_024970388.1 13503 32517 + UNC93-like protein aug3.g19553,aug3.g24190 LOC107447117 0
LOC107450126 Ptep1.0/2.0 NW_024970833.1 24806 197601 - ubiquitin carboxyl-terminal hydrolase 34 aug3.g3140,aug3.g3138,aug3.g24193 LOC107441888,LOC107450126 0
LOC107441872 Ptep1.0/2.0 NW_024971493.1 4933 28571 + geranylgeranyl pyrophosphate synthase aug3.g24192 LOC107441872 0
LOC122273088 Ptep1.0/2.0 NW_024974058.1 5777 8414 + uncharacterized LOC122273088 aug3.g24196 NA 3e-117
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02