Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448785 Ptep1.0/2.0 NW_024970011.1 70459 414809 + multiple PDZ domain protein aug3.g2433,aug3.g2434 LOC107448785 0
LOC107445832 Ptep1.0/2.0 NW_024970207.1 374912 403811 + transmembrane and coiled-coil domains protein 2 aug3.g24343,aug3.g24822 LOC107445832 0
LOC107443027 Ptep1.0/2.0 NW_024970207.1 406033 431107 - carcinine transporter aug3.g24344,aug3.g24601 LOC107443027 0
LOC107451173 Ptep1.0/2.0 NW_024971004.1 26256 117422 + serine/threonine-protein kinase unc-51 aug3.g22917,aug3.g24346,aug3.g10560 LOC107451173 0
LOC107450525 Ptep1.0/2.0 NW_024971042.1 33885 44522 + 39S ribosomal protein L11, mitochondrial aug3.g3403,aug3.g24341 LOC107450525,LOC107443013 0
LOC107443037 Ptep1.0/2.0 NW_024987990.1 17 1037 - uncharacterized LOC107443037 aug3.g24349 LOC107443037 0
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02